BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G08LP1|AL428783
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig266 1518 0.0
>3x_Contig266
Length = 1662
Score = 1518 bits (766), Expect = 0.0
Identities = 772/774 (99%)
Strand = Plus / Minus
Query: 1 atcgttcaaaatgaaaatcaccgagtgtttatcagtaaccaactcctcattaatcgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atcgttcaaaatgaaaatcaccgagtgtttatcagtaaccaactcctcattaatcgacag 719
Query: 61 tggatttgaattcaaagcattgattttggcggtgatctcgacgagttctttcttggggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 tggatttgaattcaaagcattgattttggcggtgatctcgacgagttctttcttggggtt 659
Query: 121 gaacccagaagcgtctcttctaagctgacgagattgtttcaaaatcttgatcttatcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaacccagaagcgtctcttctaagctgacgagattgtttcaaaatcttgatcttatcacc 599
Query: 181 aatcttcttcactccaagttcttctagaatctcacgatccaagtaatatagcctatcctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aatcttcttcactccaagttcttctagaatctcacgatccaagtaatatagcctatcctc 539
Query: 241 atcaaataaacggaatttctcaaatgtgggtaaatattcctcgcattctacttcaccgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atcaaataaacggaatttctcaaatgtgggtaaatattcctcgcattctacttcaccgag 479
Query: 301 aaatttctcaacgaaaggcacttcactaatggggcttgacacgtcactgctcatttctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aaatttctcaacgaaaggcacttcactaatggggcttgacacgtcactgctcatttctta 419
Query: 361 agatcttaaaaactaaggtaagcaattggagctcaactgaatatttctcgtaagcaccta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 agatcttaaaaactaaggtaagcaattggagctcaactgaatatttctcgtaagcaccta 359
Query: 421 atactagcaccctctctttccactagcaaattgcctttgatttgcttttcaaacgaatcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 atactagcaccctctctttccactagcaaattgcctttgatttgcttttcaaacgaatcg 299
Query: 481 aaacttctctgttcacggattgtattgttaatattatgaatgtttaattcaattcttgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaacttctctgttcacggattgtattgttaatattatgaatgtttaattcaattcttgcc 239
Query: 541 aaattaaaggattgttctatatttaaaccctttaacaactgaaaacaggggaaaggctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaattaaaggattgttctatatttaaaccctttaacaactgaaaacaggggaaaggctgg 179
Query: 601 agagatatggtaagtattgttagccagtattttactgaaagggccaagcagatacctgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 agagatatggtaagtattgttagccagtattttactgaaagggccaagcagatacctgat 119
Query: 661 ttaacatgagtggtaaccgtgggaatatagacaagaaagacgaagatattgggaagcttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ttaacatgagtggtaaccgtgggaatatagacaagaaagacgaagatattgggaagcttg 59
Query: 721 tcttcaagagagcagggaggacagtagaagtcgatcctgaaacattaaggaaac 774
|||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 58 tcttcaagagagcagggaggacagaaaaagtcgatcctgaaacattaaggaaac 5
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6573
Number of Sequences: 1807
Number of extensions: 6573
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)